Parse and Manipulate Research Patient Data Registry ('RPDR') Text Queries

Functions to load Research Patient Data Registry ('RPDR') text queries from Partners Healthcare institutions into R. The package also provides helper functions to manipulate data and execute common procedures such as finding the closest radiological exams considering a given timepoint, or creating a DICOM header database from the downloaded images. 'parseRPDR' currently supports txt sources: "mrn", "con", "dem", "enc", "rdt", "lab", "med", "dia", "rfv", "prc", "phy", "lno", "car", "dis", "end", "hnp", "opn", "pat", "prg", "pul", "rad" and "vis". All functionalities are parallelized for fast and efficient analyses.


Reference manual

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0.2.1 by Marton Kolossvary, 4 months ago

Browse source code at

Authors: Marton Kolossvary [aut, cre]

Documentation:   PDF Manual  

AGPL (>= 3) license

Imports data.table, stringr, readr, doParallel, foreach, bigmemory, reticulate

Suggests testthat, knitr, rmarkdown

See at CRAN