Parse and Manipulate Research Patient Data Registry ('RPDR') Text Queries

Functions to load Research Patient Data Registry ('RPDR') text queries from Partners Healthcare institutions into R. The package also provides helper functions to manipulate data and execute common procedures such as finding the closest radiological exams considering a given timepoint, or creating a DICOM header database from the downloaded images. 'parseRPDR' currently supports txt sources: "mrn", "con", "dem", "enc", "rdt", "lab", "med", "dia", "rfv", "prc", "phy", "lno", "car", "dis", "end", "hnp", "opn", "pat", "prg", "pul", "rad" and "vis". All functionalities are parallelized for fast and efficient analyses.


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install.packages("parseRPDR")

0.2.1 by Marton Kolossvary, 11 days ago


Browse source code at https://github.com/cran/parseRPDR


Authors: Marton Kolossvary [aut, cre]


Documentation:   PDF Manual  


AGPL (>= 3) license


Imports data.table, stringr, readr, doParallel, foreach, bigmemory, reticulate

Suggests testthat, knitr, rmarkdown


See at CRAN