Accurate Estimation of Clonal Coincidences and Abundances from Biological Replicates

We provide a clonality score estimator that takes full advantage of the multi-biological-replicate structure of modern sequencing experiments; it specifically takes into account the reality that, typically, the clonal coverage is well below 0.1%.


Reference manual

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1.3.0 by Yi Liu, 6 years ago

Browse source code at

Authors: Yi Liu [aut, cre] , Richard A. Olshen [aut] , Andrew Z. Fire [ctb] , Scott D. Boyd [ctb]

Documentation:   PDF Manual  

LGPL-2 license

Imports MASS, expm, corpcor

See at CRAN