The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages

Individual based simulations of hybridizing populations, where the accumulation of junctions is tracked. Furthermore, mathematical equations are provided to verify simulation outcomes. Both simulations and mathematical equations are based on Janzen (2018) .


Individual based simulations of hybridizing populations, where the accumulation of junctions is tracked. Furthermore, mathematical equations are provided to verify simulation outcomes. Both simulations and mathematical equations are based on Janzen et al. (2018)

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references

Janzen, T. , Nolte, A. W. and Traulsen, A. (2018), The breakdown of genomic ancestry blocks in hybrid lineages given a finite number of recombination sites. Evolution, 72: 735-750. https://doi.org/10.1111/evo.13436

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Reference manual

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install.packages("junctions")

1.1 by Thijs Janzen, 9 months ago


https//github.com/thijsjanzen/junctions


Browse source code at https://github.com/cran/junctions


Authors: Thijs Janzen [aut, cre]


Documentation:   PDF Manual  


GPL (>= 2) license


Imports Rcpp

Suggests testit, testthat, knitr

Linking to Rcpp

System requirements: C++11


See at CRAN