The Induced Smoothed Lasso

An implementation of the induced smoothing (IS) idea to lasso regularization models to allow estimation and inference on the model coefficients (currently hypothesis testing only). Linear, logistic, Poisson and gamma regressions with several link functions are implemented. The algorithm is described in the original paper; see and discussed in a tutorial .


Induced Smoothed Lasso

CRAN version CRAN downloads

📦 Installation

You can install the development version of islasso from GitHub:

# install.packages("devtools")
devtools::install_github("gianluca-sottile/islasso")

Once installed, load the package:

library(islasso)

🔍 Description

islasso implements the Induced Smoothed Lasso, a robust and interpretable approach for hypothesis testing in high-dimensional linear and generalized linear models.

Key features include:

  • Efficient Fortran backend for fast computation
  • Support for Gaussian, Binomial, Poisson, and Gamma families
  • Smoothed penalization for stable inference
  • Automatic selection of active variables
  • Visualization tools powered by ggplot2

🚀 Quick Example

set.seed(123)
sim <- simulXy(n = 100, p = 20, family = "gaussian")
mod <- islasso(y ~ ., data = sim$data)
summary(mod)
plot(mod)

📚 Documentation

📖 References

Cilluffo G, Sottile G, La Grutta S, Muggeo V (2020). The Induced Smoothed lasso: A practical framework for hypothesis testing in high dimensional regression. Statistical Methods in Medical Research_, 29(3), 765-777. doi:10.1177/0962280219842890

🤝 Contributing

Feel free to open issues, suggest improvements, or submit pull requests.
Bug reports and feature requests are welcome!

📜 License

islasso © 2019 by Gianluca Sottile is licensed under CC BY 4.0

Reference manual

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install.packages("islasso")

1.6.2 by Gianluca Sottile, a year ago


https://gianluca-sottile.github.io/islasso/


Report a bug at https://github.com/gianluca-sottile/islasso/issues


Browse source code at https://github.com/cran/islasso


Authors: Gianluca Sottile [aut, cre] , Giovanna Cilluffo [aut, ctb] , Vito MR Muggeo [aut, ctb]


Documentation:   PDF Manual  


GPL (>= 2) license


Imports stats, utils, graphics, cli, gridExtra, ggplot2

Depends on glmnet

Suggests knitr, lars, xfun, rmarkdown, roxygen2


See at CRAN