Informatic Sequence Classification Trees

Provides a bioinformatics pipeline for DNA meta-barcoding analysis, including functions for sequence parsing, demultiplexing, quality filtering and probabilistic taxon assignment with informatic sequence classification trees. See Wilkinson et al (2018) .


Reference manual

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1.1.1 by Shaun Wilkinson, 2 months ago

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Authors: Shaun Wilkinson [aut, cre]

Documentation:   PDF Manual  

GPL-3 license

Imports ape, aphid, kmer, openssl, phylogram, stats, utils, xml2

Suggests knitr, rmarkdown, testthat

See at CRAN