Compute, Handle and Plot Incidence of Dated Events

Provides functions and classes to compute, handle and visualise incidence from dated events for a defined time interval. Dates can be provided in various standard formats. The class 'incidence2' is used to store computed incidence and can be easily manipulated, subsetted, and plotted. This package is part of the RECON (<>) toolkit for outbreak analysis.


Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.


0.1.0 by Tim Taylor, 12 days ago

Report a bug at

Browse source code at

Authors: Tim Taylor [aut, cre] , Thibaut Jombart [aut] , Zhian N. Kamvar [aut] , Rich FitzJohn [aut] , Jun Cai [ctb] , Sangeeta Bhatia [ctb] , Jakob Schumacher [ctb] , Juliet R.C. Pulliam [ctb]

Documentation:   PDF Manual  

MIT + file LICENSE license

Imports ggplot2, aweek, rlang, dplyr, tibble, ellipsis, vctrs, magrittr, pillar

Suggests outbreaks, testthat, knitr, rmarkdown, covr

See at CRAN