GEMMA Multivariate Linear Mixed Model

Fits a multivariate linear mixed effects model that uses a polygenic term, after Zhou & Stephens (2014) (< https://www.nature.com/articles/nmeth.2848>). Of particular interest is the estimation of variance components with restricted maximum likelihood (REML) methods. Genome-wide efficient mixed-model association (GEMMA), as implemented in the package 'gemma2', uses an expectation-maximization algorithm for variance components inference for use in quantitative trait locus studies.


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install.packages("gemma2")

0.1.1 by Frederick Boehm, 2 months ago


https://github.com/fboehm/gemma2


Report a bug at https://github.com/fboehm/gemma2/issues


Browse source code at https://github.com/cran/gemma2


Authors: Frederick Boehm [aut, cre]


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports readr, Matrix

Suggests covr, testthat, knitr, rmarkdown


Imported by qtl2pleio.


See at CRAN