Analyzing Ecological Networks

A collection of advanced tools, methods and models specifically designed for analyzing different types of ecological networks - especially antagonistic (food webs, host-parasite), mutualistic (plant-pollinator, plant-fungus, etc) and competitive networks, as well as their variability in time and space. Statistical models are developed to describe and understand the mechanisms that determine species interactions, and to decipher the organization of these ecological networks (Ohlmann et al. (2019) , Gonzalez et al. (2020) , Miele et al. (2021) submitted).

A collection of cutting-edge tools, methods and models for the analysis of ecological networks with R


Reference manual

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0.5.1 by Vincent Miele, 2 months ago

Browse source code at

Authors: Stephane Dray [ctb] , Catherine Matias [ctb] , Vincent Miele [aut, cre] , Marc Ohlmann [aut] , Giovanni Poggiato [ctb] , Wilfried Thuiller [ctb]

Documentation:   PDF Manual  

GPL-3 license

Imports stats, igraph, rdiversity, Matrix.utils, blockmodels, bipartite, Rcpp

Linking to Rcpp, RcppEigen, RcppGSL

System requirements: GNU GSL

See at CRAN