Diagnostic Test Accuracy Meta-Analysis using Template Model Builder

Fits the hierarchical summary receiver operating characteristic (HSROC) model of Rutter and Gatsonis (2001) , the bivariate binomial-normal model of Reitsma et al. (2005) , the threshold-based bivariate time-to-event model of Hoyer et al. (2018) , and the latent class extensions of Liu et al. (2015) for diagnostic studies with an imperfect reference standard. Provides subgroup analyses, HSROC meta-regression, likelihood-ratio tests, summary ROC plots, and coupled forest plots.


dtametaTMB

Diagnostic Test Accuracy Meta-Analysis using Template Model Builder

dtametaTMB provides a unified framework for frequentist meta-analysis of diagnostic test accuracy (DTA) studies in R. It implements conventional gold-standard models, latent class extensions for imperfect reference standards, subgroup analyses, and multiple-threshold models within a consistent interface.


Key Features

Models

  • Reitsma bivariate random-effects model
  • Rutter and Gatsonis (HSROC) model
  • Hoyer multiple-threshold model
  • Latent class Reitsma and HSROC models for studies with an imperfect reference standard

Extensions

  • Subgroup analyses
  • HSROC meta-regression
  • Parameter constraints for sparse-data settings
  • Likelihood-ratio tests for nested model comparisons

Output

  • Summary ROC (SROC/HSROC) plots
  • Coupled forest plots
  • RevMan-compatible exports

Implementation

  • Frequentist estimation using exact binomial and multinomial likelihoods
  • Template Model Builder (TMB) backend
  • Unified interface across model families
  • Validation against published examples and Cochrane Handbook analyses

Reference manual

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install.packages("dtametaTMB")

0.1.3 by Claus Nowak, 19 days ago


https://github.com/EBME-UWK/dtametaTMB


Report a bug at https://github.com/EBME-UWK/dtametaTMB/issues


Browse source code at https://github.com/cran/dtametaTMB


Authors: Claus Nowak [aut, cre]


Documentation:   PDF Manual  


GPL (>= 2) license


Imports forestploter, glmmTMB, grid, survival, TMB

Suggests knitr, quarto, testthat

Linking to RcppEigen, TMB


See at CRAN