Piecewise Linear Segmentation by Dynamic Programming

Piecewise linear segmentation of ordered data by a dynamic programming algorithm. The algorithm was developed for time series data, e.g. growth curves, and for genome-wide read-count data from next generation sequencing, but is broadly applicable. Generic implementations of dynamic programming routines allow to scan for optimal segmentation parameters and test custom segmentation criteria ("scoring functions").


News

Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("dpseg")

0.1.1 by Rainer Machne, 4 months ago


https://gitlab.com/raim/dpseg/


Report a bug at https://gitlab.com/raim/dpseg/-/issues


Browse source code at https://github.com/cran/dpseg


Authors: Rainer Machne [aut, cre] , Peter F. Stadler [aut]


Documentation:   PDF Manual  


GPL (>= 2) license


Imports Rcpp

Suggests markdown, knitr, htmltools, RcppDynProg, microbenchmark, ggplot2

Linking to Rcpp


See at CRAN