Continuous-Time Phylogenetic Modeling

Functions for identifying, fitting, and applying continuous-time stochastic models to phylogenetic data. The package is based on methods introduced in Noonan et al. (2021) .


Reference manual

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1.0.1 by Michael J. Noonan, a month ago,

Browse source code at

Authors: Michael J. Noonan [aut, cre] , Christen H. Fleming [aut]

Documentation:   PDF Manual  

GPL-3 license

Imports slouch, ClusterR, methods, stats, utils

Depends on ape, ctmm

Suggests phytools, viridis, knitr, rmarkdown, nlme, progress, graphics, grDevices

See at CRAN