Helpful Functions for Cleaning Surveillance Data

Helpful functions for the cleaning and manipulation of surveillance data, especially with regards to the creation and validation of panel data from individual level surveillance data.


cstidy

CRAN status CRAN downloads

Overview

cstidy contains helpful functions for the cleaning and manipulation of surveillance data, especially with regards to the creation and validation of panel data from individual level surveillance data.

Read the introduction vignette here or run help(package="cstidy").

csverse

The csverse is a set of R packages developed to help solve problems that frequently occur when performing disease surveillance.

install.packages("attrib")
install.packages("cs9")
install.packages("csalert")
install.packages("csdata")
install.packages("csdb")
install.packages("csmaps")
install.packages("csstyle")
install.packages("cstidy")
install.packages("cstime")
install.packages("csutil")
install.packages("org")
install.packages("plnr")

Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("cstidy")

2025.10.27 by Richard Aubrey White, a year ago


https://www.csids.no/cstidy/, https://github.com/csids/cstidy


Report a bug at https://github.com/csids/cstidy/issues


Browse source code at https://github.com/cran/cstidy


Authors: Richard Aubrey White [aut, cre] (ORCID: , CSIDS [cph]


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports data.table, magrittr, ggplot2, csdata, cstime, crayon, digest, stringr, methods

Suggests testthat, knitr, rmarkdown, rstudioapi, glue, gt, dplyr, purrr


Imported by csalert.


See at CRAN