Create and Manipulate BioCompute Objects

Tools to create, validate, and export BioCompute Objects described in King et al. (2019) . Users can encode information in data frames, and compose BioCompute Objects from the domains defined by the standard. A checksum validator and a JSON schema validator are provided. This package also supports exporting BioCompute Objects as JSON, PDF, HTML, or 'Word' documents, and exporting to cloud-based platforms.


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install.packages("biocompute")

1.0.3 by Nan Xiao, 7 days ago


https://sbg.github.io/biocompute/, https://github.com/sbg/biocompute


Report a bug at https://github.com/sbg/biocompute/issues


Browse source code at https://github.com/cran/biocompute


Authors: Nan Xiao [aut, cre] , Soner Koc [aut] , Dennis Dean [aut] , Seven Bridges Genomics [cph, fnd]


Documentation:   PDF Manual  


AGPL-3 license


Imports methods, jsonlite, yaml, digest, uuid, jsonvalidate, httr, curl, crayon, cli, stringr, magrittr, rmarkdown

Suggests knitr


See at CRAN