Quantify, profile and remove ambient mRNA contamination (the "soup") from droplet based single cell RNA-seq experiments. Implements the method described in Young et al. (2018) .
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Matthew Daniel Young, 4 months ago
Browse source code at
Matthew Daniel Young
Imports ggplot2, Matrix, methods, Seurat
Suggests knitr, rstan, DropletUtils, rmarkdown, formatR
See at CRAN