Visualize Data for Host and Viral Population from 'SMITIDstruct' using 'HTMLwidgets'

Visualisation tools for 'SMITIDstruct' package. Allow to visualize host timeline, transmission tree, index diversities and variant graph using 'HTMLwidgets'. It mainly using 'D3JS' javascript framework.

Reference manual

install.packages("SMITIDvisu")

0.0.9 by Jean-Francois Rey, 6 years ago

https://informatique-mia.inrae.fr/biosp/anr-smitid-project/, https://gitlab.paca.inrae.fr/SMITID/visu/

Browse source code at https://github.com/cran/SMITIDvisu

Authors: Jean-Francois Rey [aut, cre] , Julien Boge [ctb]

Documentation: PDF Manual

GPL (>= 3) | file LICENSE license

Imports Rcpp, htmlwidgets, yaml, jsonlite, magrittr

Depends on utils

Suggests SMITIDstruct, knitr, shiny, testthat

Linking to Rcpp

System requirements: C++11

See at CRAN

SMITIDvisu

Visualize Data for Host and Viral Population from 'SMITIDstruct' using 'HTMLwidgets'

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