SIPmg

Statistical Analysis to Identify Isotope Incorporating Metagenomic Features

Statistical analysis as part of a quantitative stable isotope probing (SIP) metagenomics study to identify isotope incorporating metagenomic features. Helpful reading and a vignette in bookdown format is provided on the package site < https://zielslab.github.io/SIPmg.github.io/>.

Reference manual

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install.packages("SIPmg")

3.0 by Pranav Sampara, a year ago

https://zielslab.github.io/SIPmg.github.io/

Report a bug at https://github.com/ZielsLab/SIPmg/issues

Browse source code at https://github.com/cran/SIPmg

Authors: Pranav Sampara [aut, cre] , Kate Waring [ctb] , Ryan Ziels [aut] , Alma Garcia Roche [aut]

Documentation:   PDF Manual  

GPL-2 license

Imports data.table, DESeq2, dplyr, ggplot2, ggpubr, glue, lazyeval, magrittr, MASS, phyloseq, plyr, purrr, rlang, stringr, tibble, tidyr, utils

Suggests BiocManager, EBImage, knitr, readr, rmarkdown, tidyverse

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