Get data / Define model / ??? / Profit! 'ProFit' is a Bayesian galaxy fitting tool that uses a fast 'C++' image generation library and a flexible interface to a large number of likelihood samplers.
Latest version is always on GitHub at ICRAR/ProFit. Noted which version is on CRAN.
Moved some vignettes to inst/vignettes-nonCRAN make things CRAN complient.
FEATURE: Some more code is now pushed across to libprofit, especially on the fine sampling and padding side.
FIXED: Some build issues flagged by CRAN.
FIXED: Replaced R2CUBA with cubature since R2CUBA is being removed from CRAN.
FIXED: Vignettes to not run ProFound (and by proxy EBImage, which is not supported by CRAN now).
FEATURE: Added OpenCL support
v1.0 First released on CRAN & GitHub
FEATURE: You can now directly specify the region to use for fitting in profitSetupData (before it always used a combination of segim and mask, which it will use if this is not provided). Old code will work as before. Argument order has changed to accommodate.
CHANGE: profitRemakeModelList -> profitRemakeModellist (to be more consistent with how modellist is named throughout ProFit).
FEATURE: profitRemakeModellist can now take Data as an input for simplicity.
FIXED: Solaris issue with gauss.cpp.
FIXED: profitMakePlots so the region is shown correctly.
CHANGE: Minor internal naming changes.
FIXED: Occassional issue with profitMakePlots failing for certain region over-plots.
FIXED: Intervals now work properly with the PSF model.
FEATURE: GPU support via OpenCL (see vignettes).
FEATURE: OpenMP support (see vignettes).
Some minor mixes.
FEATURE: A large number of utility functions added to aid in creating inputs for profitSetupData. In particular profitMakeSegim and profitMakeSegimExpand (for segmenting an image and making a segim map, this requires EBImage to be installed), profitSkyEst (for estimating the sky), profitGainEst (for estimating the gain), profitMakeSigma (for making a sigma map), and profitImBlur / profitImGrad / profitImDiff for transforming images. Also profitSkyEstLoc (local sky) and profitMakeSkyMap (coarse sky map generator) and profitMakeSkyGrid (fine sky map generator). Various very short utility functions added.
FEATURE: profitDeprojectImageEllipse for circularising galaxies.
FEATURE: Added new vignettes on making segmentation maps, sigma maps, and the Full Monty of estimating all ProFit inputs from just image pixel data.
FIXED: profitMakeGaussianPSF had a mistake with the fwhm parameter (the radius it created was x2 too big). This was reported by Sarah Casura
FFTW integration within libprofit