An Efficient Swiss Army Knife for Population Genomic Analyses

Provides efficient tools for population genomics data analysis, able to process individual loci, large sets of loci, or whole genomes. PopGenome not only implements a wide range of population genetics statistics, but also facilitates the easy implementation of new algorithms by other researchers. PopGenome is optimized for speed via the seamless integration of C code.


Reference manual

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install.packages("PopGenome")

2.7.5 by Bastian Pfeifer, 7 years ago


Browse source code at https://github.com/cran/PopGenome


Authors: Bastian Pfeifer [aut, cre] , Ulrich Wittelsbuerger [ctb] , Heng Li [ctb] , Bob Handsaker [ctb]


Documentation:   PDF Manual  


GPL-3 license


Imports methods

Depends on ff

Suggests parallel, bigmemory, BASIX, WhopGenome, BlockFeST

System requirements: zlib headers and library.


Suggested by coala.


See at CRAN