Bayesian Calculation of Region-Specific Fixation Index to Detect Local Adaptation

An R implementation of an extension of the 'BayeScan' software (Foll, 2008) for codominant markers, adding the option to group individual SNPs into pre-defined blocks. A typical application of this new approach is the identification of genomic regions, genes, or gene sets containing one or more SNPs that evolved under directional selection.


Reference manual

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1.6 by Bastian Pfeifer, 2 years ago

Browse source code at

Authors: Bastian Pfeifer

Documentation:   PDF Manual  

GPL-2 license

Imports methods

Depends on BASIX

Suggests PopGenome

Suggested by PopGenome.

See at CRAN