Structural Exploration of the Gene Ontology (GO) Knowledge Base

It provides an effective, efficient, and fast way to explore the Gene Ontology (GO). Given a set of genes, the package contains functions to assess the GO and obtain the terms associated with the genes and the levels of the GO terms. The package provides functions for the three different GO ontology. We discussed the methods explicitly in the following article .


News

Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("GOxploreR")

1.1.0 by Kalifa Manjang, 7 days ago


Browse source code at https://github.com/cran/GOxploreR


Authors: Kalifa Manjang , Frank Emmert-Streib , Shailesh Tripathi , Olli Yli-Harja , Matthias Dehmer


Documentation:   PDF Manual  


GPL-2 license


Imports GO.db, igraph, network, ggnetwork, dplyr, biomaRt, annotate, graphics

Depends on ggplot2, gontr

Suggests knitr, rmarkdown


See at CRAN