Extract Drugs from Differential Expression Data from LINCS Database

Get Drug information from given differential expression profile. The package search for the bioactive compounds from reference databases such as LINCS containing the genome-wide gene expression signature (GES) from tens of thousands of drug and genetic perturbations (Subramanian et al. (2017) ).


Reference manual

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install.packages("DFD")

0.4.0 by Mohamed Soudy, 10 months ago


https://github.com/MohmedSoudy/DFD


Report a bug at https://github.com/MohmedSoudy/DFD/issues


Browse source code at https://github.com/cran/DFD


Authors: Mohamed Soudy [aut, cre]


Documentation:   PDF Manual  


GPL-3 license


Imports stringr, gprofiler2, scales, ggplot2, gridExtra, ggpubr

Suggests signatureSearch, signatureSearchData


See at CRAN