Mixed Models for Biological, Clustered and Longitudinal Data

Fits and interprets mixed-effects models for clustered, longitudinal and heterogeneous biological data. Provides variance partitioning, intraclass correlation, penalized likelihood summaries, a heterogeneous-data information criterion, model comparison, diagnostics, and ensemble-style summaries for multilevel data. The package is designed as a complementary, interpretable workflow around established mixed-model methods. Methods for intraclass correlation and variance partitioning are informed by Nakagawa and Schielzeth (2010) and Nakagawa et al. (2017) . Mixed-effects modeling approaches are described by Zuur et al. (2009) .


BioMixModel

BioMixModel provides an interpretable workflow for mixed-effects analysis of clustered, longitudinal and heterogeneous biological data. Version 1.0.0 focuses on model fitting, variance partitioning, ICC, heterogeneity-aware AIC (HAIC), comparison and diagnostics, while using established nlme machinery for random-effects estimation.

Reference manual

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install.packages("BioMixModel")

1.0.0 by Vinodhkumar Obli Rajendran, 21 days ago


https://github.com/vinodhpmd/BioMixModel


Report a bug at https://github.com/vinodhpmd/BioMixModel/issues


Browse source code at https://github.com/cran/BioMixModel


Authors: Vinodhkumar Obli Rajendran [aut, cre] , Keerthi Aaradhana [aut]


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports stats, graphics

Suggests testthat, glmmTMB, nlme, mgcv, survival, coxme, brms


See at CRAN