Predicts amyloid proteins using random forests trained on the n-gram encoded peptides. The implemented algorithm can be accessed from both the command line and shiny-based GUI.
AmyloGram predicts amyloid proteins using n-gram encoding and random forests. It can be also accessed as a web-based service http://www.smorfland.uni.wroc.pl/shiny/AmyloGram/.
AmyloGram can be used installed from CRAN as the R package:
You can install the latest development version of the code using the
devtools R package.
After installation GUI can be accessed locally:
Predictions might be also made in the batch mode: