Linkage Map Construction using the MSTmap Algorithm

Functions for Accurate and Speedy linkage map construction, manipulation and diagnosis of Doubled Haploid, Backcross and Recombinant Inbred 'R/qtl' objects. This includes extremely fast linkage map clustering and optimal marker ordering using 'MSTmap' (see Wu et al.,2008).

ASMap

Linkage Map Construction using the MSTmap Algorithm

Functions for Accurate and Speedy linkage map construction, manipulation and diagnosis of Doubled Haploid, Backcross and Recombinant Inbred 'R/qtl' objects. This includes extremely fast linkage map clustering and optimal marker ordering using 'MSTmap' (see Wu et al.,2008).

Installing

To install the latest version from CRAN, use the following:

install.packages("ASMap")

To install the latest development version from GitHub, use the following:

if(!require("remotes")) install.packages("remotes") 
remotes::install_github("DrJ001/ASMap")

Using the package

Load the package and start using it with:

library(ASMap)

If you find this package useful, please cite it! Type citation("ASMap") on the R console to find out how.