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An Automated Cleaning Tool for Semantic and Linguistic Data
Implements several functions that automates the cleaning and spell-checking of text data. Also converges, finalizes, removes plurals and continuous strings, and puts text data in binary format for semantic network analysis. Uses the 'SemNetDictionaries' package to make the cleaning process more accurate, efficient, and reproducible.
Clean and Analyze Continuous Glucose Monitor Data
This code provides several different functions for cleaning and analyzing continuous glucose monitor data. Currently it works with 'Dexcom', 'iPro 2', 'Diasend', 'Libre', or 'Carelink' data. The cleandata() function takes a directory of CGM data files and prepares them for analysis. cgmvariables() iterates through a directory of cleaned CGM data files and produces a single spreadsheet with data for each file in either rows or columns. The column format of this spreadsheet is compatible with REDCap data upload. cgmreport() also iterates through a directory of cleaned data, and produces PDFs of individual and aggregate AGP plots. Please visit < https://github.com/childhealthbiostatscore/R-Packages/> to download the new-user guide.
Automation and Standardization of Cleaning Clinical Laboratory Data
Navigating the shift of clinical laboratory data from primary everyday clinical use to secondary research purposes presents a significant challenge. Given the substantial time and expertise required for lab data pre-processing and cleaning and the lack of all-in-one tools tailored for this need, we developed our algorithm 'lab2clean' as an open-source R-package. 'lab2clean' package is set to automate and standardize the intricate process of cleaning clinical laboratory results. With a keen focus on improving the data quality of laboratory result values and units, our goal is to equip researchers with a straightforward, plug-and-play tool, making it smoother for them to unlock the true potential of clinical laboratory data in clinical research and clinical machine learning (ML) model development. Functions to clean & validate result values (Version 1.0) are described in detail in 'Zayed et al. (2024)'
Extract and Clean World Football (Soccer) Data
Allow users to obtain clean and tidy football (soccer) game, team and player data. Data is collected from a number of popular sites, including 'FBref', transfer and valuations data from 'Transfermarkt'< https://www.transfermarkt.com/> and shooting location and other match stats data from 'Understat'< https://understat.com/> and 'fotmob'< https://www.fotmob.com/>. It gives users the ability to access data more efficiently, rather than having to export data tables to files before being able to complete their analysis.
Data Import, Cleaning, and Conversions for Swimming Results
The goal of the 'SwimmeR' package is to provide means of acquiring, and then analyzing, data from swimming (and diving) competitions. To that end 'SwimmeR' allows results to be read in from .html sources, like 'Hy-Tek' real time results pages, '.pdf' files, 'ISL' results, 'Omega' results, and (on a development basis) '.hy3' files. Once read in, 'SwimmeR' can convert swimming times (performances) between the computationally useful format of seconds reported to the '100ths' place (e.g. 95.37), and the conventional reporting format (1:35.37) used in the swimming community. 'SwimmeR' can also score meets in a variety of formats with user defined point values, convert times between courses ('LCM', 'SCM', 'SCY') and draw single elimination brackets, as well as providing a suite of tools for working cleaning swimming data. This is a developmental package, not yet mature.
Streamline Data Import, Cleaning and Recoding from 'Excel'
A small group of functions to read in a data dictionary and the corresponding data table from 'Excel' and to automate the cleaning, re-coding and creation of simple calculated variables. This package was designed to be a companion to the macro-enabled 'Excel' template available on the GitHub site, but works with any similarly-formatted 'Excel' data.
R Functions to Download and Clean Brazilian Electoral Data
Offers a set of functions to easily download and clean Brazilian electoral data from the Superior Electoral Court and 'CepespData' websites. Among other features, the package retrieves data on local and federal elections for all positions (city councilor, mayor, state deputy, federal deputy, governor, and president) aggregated by state, city, and electoral zones.
Clean and Harmonise 'Malawi Integrated Household Survey' Data
An offline suite of tools to clean, aggregate, and harmonise data from the 'Malawi Integrated Household Survey' ('IHS'), covering rounds two through six (2004 to 2025). Provides crop-specific unit conversions, stratified winsorization, consumer-price deflation, and automatic cross-round harmonisation for complex survey designs.
Download and Tidy Australian Clean Energy Regulator Data
Fetch Australian Clean Energy Regulator data on carbon credits, safeguard mechanism facilities, renewable energy certificates, and greenhouse gas reporting. Provides tidy access to the Australian Carbon Credit Unit ('ACCU') Scheme project register, Safeguard Mechanism baselines and covered emissions, Large-scale Renewable Energy Target ('LRET') power station accreditations, Small-scale Renewable Energy Scheme ('SRES') installation data, the National Greenhouse and Energy Reporting ('NGER') scheme, and Quarterly Carbon Market Reports < https://cer.gov.au/markets/reports-and-data>. Includes a post-Chubb ACCU integrity layer (Chubb 2022 Independent Review), Safeguard reform handling (declining industry baselines from July 2023), National Greenhouse and Energy Reporting scope discipline (Scope 1 / Scope 2 market vs location / Climate Active), reconciliation against the Quarterly Carbon Market Report, and reproducibility helpers (snapshot pinning, SHA-256 cache integrity, session manifest, optional Zenodo deposit). Data is published by the Clean Energy Regulator under a Creative Commons Attribution 4.0 International licence.
Cleaning and Visualizing Implicit Association Test (IAT) Data
Implements the standard D-Scoring algorithm (Greenwald, Banaji, & Nosek, 2003) for Implicit Association Test (IAT) data and includes plotting capabilities for exploring raw IAT data.