Tidy Common Workflow Language Tools and Workflows

The Common Workflow Language < https://www.commonwl.org/> is an open standard for describing data analysis workflows. This package takes the raw Common Workflow Language workflows encoded in JSON or 'YAML' and turns the workflow elements into tidy data frames or lists. A graph representation for the workflow can be constructed and visualized with the parsed workflow inputs, outputs, and steps. Users can embed the visualizations in their 'Shiny' applications, and export them as HTML files or static images.


Reference manual

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1.0.5 by Soner Koc, 2 months ago

https://sbg.github.io/tidycwl/, https://github.com/sbg/tidycwl

Report a bug at https://github.com/sbg/tidycwl/issues

Browse source code at https://github.com/cran/tidycwl

Authors: Soner Koc [aut, cre] , Nan Xiao [aut] , Dennis Dean [aut] , Seven Bridges Genomics [cph, fnd]

Documentation:   PDF Manual  

AGPL-3 license

Imports jsonlite, yaml, dplyr, magrittr, visNetwork, htmlwidgets, webshot

Suggests knitr, rmarkdown, shiny

System requirements: PhantomJS (https://phantomjs.org), pandoc (>= 1.12.3) - https://pandoc.org.

See at CRAN