Convert Data among QTL Mapping Packages

Functions to convert data structures among the 'qtl2', 'qtl', and 'DOQTL' packages for mapping quantitative trait loci (QTL).

R/qtl2 (aka qtl2) is a reimplementation of the QTL analysis software R/qtl, to better handle high-dimensional data and complex cross designs.

The qtl2convert package is for converting data among the R/qtl2, DOQTL, and R/qtl formats.

Install the qtl2convert package from CRAN:

install.packages("qtl2convert")

Alternatively, install it from R universe:

install.packages("qtl2convert", repos=c("https://rqtl.r-universe.dev",
                                        "https://cloud.r-project.org"))

Or use remotes to install it from its GitHub source:

install.packages("remotes")
remotes::install_github("rqtl/qtl2convert")

Licensed under GPL-3.

Reference manual

install.packages("qtl2convert")

0.36 by Karl W Broman, 3 months ago

Report a bug at https://github.com/rqtl/qtl2convert/issues

Browse source code at https://github.com/cran/qtl2convert

Authors: Karl W Broman [aut, cre] (ORCID:

Documentation: PDF Manual

GPL-3 license

Imports Rcpp, qtl, qtl2, utils, stats

Suggests testthat, devtools, roxygen2

Linking to Rcpp