Query Composite Hypotheses

Provides functions for the joint analysis of Q sets of p-values obtained for the same list of items. This joint analysis is performed by querying a composite hypothesis, i.e. an arbitrary complex combination of simple hypotheses, as described in Mary-Huard et al. (2021) and De Walsche et al.(2025) . In this approach, the Q-uplet of p-values associated with each item is distributed as a multivariate mixture, where each of the 2^Q components corresponds to a specific combination of simple hypotheses. The dependence between the p-value series is considered using a Gaussian copula function. A p-value for the composite hypothesis test is derived from the posterior probabilities.


Reference manual

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install.packages("qch")

2.1.3 by Tristan Mary-Huard, 5 months ago


Browse source code at https://github.com/cran/qch


Authors: Tristan Mary-Huard [aut, cre] (ORCID: , Annaig De Walsche [aut] (ORCID: , Franck Gauthier [ctb]


Documentation:   PDF Manual  


GPL-3 license


Imports copula, dplyr, graphics, ks, purrr, Rcpp, stats, stringr, utils

Linking to Rcpp, RcppArmadillo


See at CRAN