Functions for Calculating Ontological Similarities

Functions for calculating semantic similarities between ontological terms or sets of ontological terms based on term information content and assessing statistical significance of similarity in the context of a collection of sets of ontological terms.


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Reference manual

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install.packages("ontologySimilarity")

2.2 by Daniel Greene, 2 years ago


Browse source code at https://github.com/cran/ontologySimilarity


Authors: Daniel Greene


Documentation:   PDF Manual  


GPL (>= 2) license


Imports Rcpp, ontologyIndex

Suggests knitr, paintmap

Linking to Rcpp


Imported by SimReg.

Suggested by ontologyIndex.


See at CRAN