Visualises multiple sequence alignments dynamically within the Shiny web application framework.
Any of these types of objects can be passed to msaR to create an html widget. This package in not on CRAN/Bioconductor and can be installed using devtools. See the online docs for an interactive version of this widget.
#devtools::install_github('zachcp/msaR')library(msaR)# read some sequences from a multiple sequence alignment file and displayseqfile <- system.file("sequences","AHBA.aln",package="msaR")msaR(seqfile)
msaR can be used as a widget with the Shiny web application framework.
output$msa <- renderMsaR(msaR(seqfile))
All contributions are welcome! Please feel free to submit a pull request.
If you have any problem or suggestion please open an issue here
This project is licensed under the Boost Software License 1.0.
If you use the MSAViewer on your website, it solely requires you to link to us
0.1.0 Basic Release to CRAN