Exploratory graphical analysis of multivariate data, specifically gene expression data with different projection methods: principal component analysis, correspondence analysis, spectral map analysis.
1.0-22
o further fix in plot.mpm in the presence of label.tol.col
1.0-21
o fix bug in plot.mpm that occurred when specifying col.group
1.0-20
o trivial fix in .onAttach
o small documentation improvements
1.0-19
o fix in plot.mpm to allow depiction of spectral maps with negative numbers
o add option to only label a limited number of columns (label.col.tol)
1.0-18
o rename dump.summary.mpm to export.summary.mpm and add generic function
1.0-17
o compress data files better and move to Roxygen-based documentation
1.0-16
o remove dependency on geneplotter for plot.mpm with do.smoothScatter = TRUE and replace with dependency
on recommended package KernSmooth
o add legend argument
1.0-15
o extend the sampleNames argument to allow to specify the labels to be used on
the plot as a character vector (alternatively to the use of a logical of length
one as introduced in 1.0-14)
1.0-14
o introduce sampleNames argument to display sample names (TRUE) or not (FALSE)
1.0-13
o modification of default colors for smoothScatter
1.0-12
o return invisibly for plot.mpm
o introduce tests directory and script
o introduce NAMESPACE
o display package version on loading package
1.0-11
o added dump.summary.mpm function to package
o fix sub title
1.0-10
o introduction of labels argument for plot.mpm in order to allow
labels to be different from the row names
1.0-9
o clarification plot.mpm documentation
o removed (less flexible) title' argument in favor of classical main / sub titles which can be passed to eqscplot via...'
instead