MAnifold-Constrained Gaussian Process Inference

Provides fast and accurate inference for the parameter estimation problem in Ordinary Differential Equations, including the case when there are unobserved system components. Implements the MAGI method (MAnifold-constrained Gaussian process Inference) of Yang, Wong, and Kou (2021) .


Reference manual

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1.1.5 by Shihao Yang, 5 days ago

Browse source code at

Authors: Shihao Yang [aut, cre] , Samuel W.K. Wong [aut] , S.C. Kou [ctb, cph] (Contributor of MAGI method development)

Documentation:   PDF Manual  

MIT + file LICENSE license

Imports Rcpp, gridExtra, gridBase, grid, methods, deSolve

Suggests testthat, mvtnorm, covr, knitr, MASS, rmarkdown, markdown

Linking to Rcpp, RcppArmadillo, BH, roptim

See at CRAN