A Fast and Scalable Joint Estimator for Integrating Additional Knowledge in Learning Multiple Related Sparse Gaussian Graphical Models

Provides a fast and scalable joint estimator for integrating additional knowledge in learning multiple related sparse Gaussian Graphical Models (JEEK). The JEEK algorithm can be used to fast estimate multiple related precision matrices in a large-scale. For instance, it can identify multiple gene networks from multi-context gene expression datasets. By performing data-driven network inference from high-dimensional and heterogeneous data sets, this tool can help users effectively translate aggregated data into knowledge that take the form of graphs among entities. Please run demo(jeek) to learn the basic functions provided by this package. For further details, please read the original paper: Beilun Wang, Arshdeep Sekhon, Yanjun Qi "A Fast and Scalable Joint Estimator for Integrating Additional Knowledge in Learning Multiple Related Sparse Gaussian Graphical Models" (ICML 2018) .


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install.packages("jeek")

1.1.1 by Beilun Wang, a year ago


https://github.com/QData/jeek


Report a bug at https://github.com/QData/jeek


Browse source code at https://github.com/cran/jeek


Authors: Beilun Wang [aut, cre] , Yanjun Qi [aut] , Zhaoyang Wang [aut]


Documentation:   PDF Manual  


GPL-2 license


Depends on lpSolve, pcaPP, igraph

Suggests parallel


See at CRAN