Drawing Gapped Cluster Heatmap with 'ggplot2'

The gap encodes the distance between clusters and improves interpretation of cluster heatmaps. The gaps can be of the same distance based on a height threshold to cut the dendrogram. Another option is to vary the size of gaps based on the distance between clusters.


Reference manual

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0.1.0 by Evan Biederstedt, 6 months ago


Report a bug at https://github.com/evanbiederstedt/gapmap/issues

Browse source code at https://github.com/cran/gapmap

Authors: Ryo Sakai [aut] , Evan Biederstedt [cre, aut]

Documentation:   PDF Manual  

GPL-2 | GPL-3 license

Imports grid

Depends on ggplot2, reshape2

Suggests knitr, dendsort, RColorBrewer, rmarkdown

Suggested by dendsort.

See at CRAN