Cumulative Percent Decay Curve Generator

Calculates and visualises cumulative percent 'decay' curves, which are typically calculated from metagenomic taxonomic profiles. These can be used to estimate the level of expected 'endogenous' taxa at different abundance levels retrieved from metagenomic samples, when comparing to samples of known sampling site or source.


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install.packages("cuperdec")

1.0.0 by James A. Fellows Yates, 4 months ago


https://github.com/jfy133/cuperdec


Report a bug at https://github.com/jfy133/cuperdec/issues


Browse source code at https://github.com/cran/cuperdec


Authors: James A. Fellows Yates [aut, cre]


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports dplyr, ggplot2, magrittr, readr, rlang, tidyr

Suggests knitr, rmarkdown, testthat


See at CRAN