Correcting the Coverage of Credible Sets from Bayesian Genetic Fine Mapping

Using a computationally efficient method, the package can be used to find the corrected coverage estimate of a credible set of putative causal variants from Bayesian genetic fine-mapping. The package can also be used to obtain a corrected credible set if required; that is, the smallest set of variants required such that the corrected coverage estimate of the resultant credible set is within some user defined accuracy of the desired coverage. Maller et al. (2012) , Wakefield (2009) , Fortune and Wallace (2018) .


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1.2.1 by Anna Hutchinson, 2 years ago

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Authors: Anna Hutchinson [aut, cre] , Chris Wallace [aut] , Kevin Kunzmann [ctb]

Documentation:   PDF Manual  

MIT + file LICENSE license

Imports data.table, magrittr, stats, matrixStats, Rcpp

Suggests covr, dplyr, knitr, mvtnorm, rmarkdown, testthat, pkgdown

Linking to Rcpp, RcppArmadillo

System requirements: C++11

See at CRAN