Extracts the Backbone from Weighted Graphs

Provides methods for extracting from a weighted graph a binary or signed backbone that retains only the significant edges. The user may input a weighted graph, or a bipartite graph from which a weighted graph is first constructed via projection. Backbone extraction methods include the stochastic degree sequence model (SDSM; Neal, Z. P. (2014). ), the fixed degree sequence model (FDSM; Zweig, K. A., and Kaufmann, M. (2011). ), the fixed row model (FRM; Neal, Z. P. (2013). ), the fixed column model (FCM; Neal, Domagalski, and Sagan (2021). ), the fixed fill model (FFM; Neal, Domagalski, and Sagan (2021). ), and a universal threshold method.


Reference manual

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1.5.0 by Zachary Neal, 3 months ago

https://www.zacharyneal.com/backbone, https://github.com/domagal9/backbone

Report a bug at https://github.com/domagal9/backbone/issues

Browse source code at https://github.com/cran/backbone

Authors: Zachary Neal [aut, cre] , Rachel Domagalski [aut] , Bruce Sagan [aut]

Documentation:   PDF Manual  

GPL-3 license

Imports Matrix, methods, stats, utils, igraph, network, PoissonBinomial

Suggests knitr, rmarkdown, testthat

See at CRAN