Visualizing Multiple Sequence Alignments with 'ggplot2'

Create extensible figures of multiple sequence alignments, using the 'ggplot2' plotting engine. 'alignfigr' will create a baseline figure of a multiple sequence alignment which can be fully customized to the user's liking with standard 'ggplot2' features.


R package for creating multiple sequence alignment figures. Using the endless power of ggplot2, alignfigR creates colorful graphical representations of your sequence alignments. alignfigR will provide you with a ggplot object which you can further customize however you wish.

For usage instructions and examples, see the alignfigR vignette.

Please direct all questions to https://github.com/sjspielman/alignfigr/issues.

News

Release of Version 0.1.1

Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("alignfigR")

0.1.1 by Stephanie J. Spielman, 6 months ago


https://github.com/sjspielman/alignfigR


Report a bug at https://github.com/sjspielman/alignfigR/issues


Browse source code at https://github.com/cran/alignfigR


Authors: Stephanie J. Spielman [aut, cre]


Documentation:   PDF Manual  


GPL-2 license


Imports ggplot2

Suggests knitr


See at CRAN