Flags Acute Kidney Injury (AKI)

Flagger to detect acute kidney injury (AKI) in a patient dataset.


akiFlagger

Acute Kidney Injury (AKI) is a sudden onset of kidney failure and damage marked by an increase in the serum creatinine levels (amongst other biomarkers) of the patient. Kidney Disease Improving Global Outcomes (KDIGO) has a set of guidelines and standard definitions of AKI:

  • Stage 1: 50% increase in creatinine in < 7 days or 0.3 increase in creatinine in < 48 hours

  • Stage 2: 100% increase in (or doubling of) creatinine in < 7 days

  • Stage 3: 200% increase in (or tripling of) creatinine in < 7 days

This package contains a flagger to determine if a patient has developed AKI based on longitudinal data of serum creatinine measurements.

Installation

The package can be installed via CRAN.

install.packages("akiFlagger")

Alternatively, you can install the development version of the package from GitHub with:

# install.packages("devtools")
devtools::install_github("isaranwrap/akiFlagger")

Getting Started

There is a walk-through vignette available on Github to introduce the necessary components and parameters of the flagger. The notebook has also been adapted in the documentation.

Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("akiFlagger")

0.3.0 by Ishan Saran, 6 years ago


https://github.com/isaranwrap/akiFlagger


Report a bug at https://github.com/isaranwrap/akiFlagger/issues


Browse source code at https://github.com/cran/akiFlagger


Authors: Ishan Saran [aut, cre] , Shivam Saran [aut] , Rishi Saran [aut] , Aditya Biswas [ctb] , Sankee Mummareddy [ctb] , Yu Yamamoto [ctb] , Francis Perry Wilson [ctb, ths]


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports dplyr, data.table, zoo, shiny

Suggests testthat


See at CRAN