An Interface for Running 'ADMIXTOOLS' Analyses

An interface for performing all stages of 'ADMIXTOOLS' analyses (<>) entirely from R. Wrapper functions (D, f4, f3, etc.) completely automate the generation of intermediate configuration files, run 'ADMIXTOOLS' programs on the command-line, and parse output files to extract values of interest. This allows users to focus on the analysis itself instead of worrying about low-level technical details. A set of complementary functions for processing and filtering of data in the 'EIGENSTRAT' format is also provided.


Reference manual

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0.9.1 by Martin Petr, a month ago

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Authors: Martin Petr [aut, cre]

Documentation:   PDF Manual  

MIT + file LICENSE license

Imports dplyr, magrittr, readr, stringr, tibble, stats, rlang, utils

Suggests covr, glue, testthat, tidyr, knitr, rmarkdown, tidyverse

System requirements: ADMIXTOOLS suite of command-line utilities for population genetics. See <> for the most recent installation instructions and further information.

See at CRAN