Pediatrics Extension Package for ADaM in 'R' Asset Library

A toolbox for programming Clinical Data Standards Interchange Consortium (CDISC) compliant Analysis Data Model (ADaM) datasets in R. ADaM datasets are a mandatory part of any New Drug or Biologics License Application submitted to the United States Food and Drug Administration (FDA). Analysis derivations are implemented in accordance with the "Analysis Data Model Implementation Guide" (CDISC Analysis Data Model Team, 2021, < https://www.cdisc.org/standards/foundational/adam>). The package is an extension package of the 'admiral' package for pediatric clinical trials.


admiralpeds

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Pediatrics extension package for ADaM in R Asset Library {admiral}.

Explore all the other packages in the {admiral} ecosystem to learn more about ADaM programming in R.

Purpose

To provide a complementary (to {admiral}) toolbox that enables users to develop specifics for pediatric clinical trials.

Installation

The package is available from CRAN and can be installed with:

install.packages("admiralpeds")

To install the latest development version of the package directly from GitHub use the following code:

# install.packages("pak")
pak::pkg_install("admiralpeds", dependencies = TRUE)

Dependencies

The latest version of the package works with the latest versions of the packages stated in DESCRIPTION.

If a previous version of the package should be used, it is recommended to use latest version of the dependencies at the point of time when the previous version of {admiralpeds} was released.

Scope

  • Build a toolbox of re-usable functions and utilities to create pediatrics-specific ADaM datasets in R in a modular manner.
  • All functions are created based upon the ADaM Implementation Guide and aim to facilitate the programming of ADaM dataset standards.
  • Initially the package will focus on Anthropometric indicators (i.e. child growth/development charts).

Expectations

{admiralpeds} is expected to complement {admiral} and provide functions to help with the creation of analyses required for pediatric trial ADaMs.

References and Documentation

R Versions

Here's a summary of our strategy for this package related to R versions:

  • R versions for developers and users will follow the same as {admiral} core package.
  • For development the main branch of {admiral} core is used as a dependency. For releasing a new {admiralpeds} version it must run using the latest released {admiral} core version.

Contact

We use the following for support and communications between user and developer community:

  • Slack - for informal discussions, Q&A and building our user community. If you don't have access, use this link to join the pharmaverse Slack workspace
  • GitHub Issues - for direct feedback, enhancement requests or raising bugs

Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("admiralpeds")

0.4.0 by Fanny Gautier, 3 months ago


https://pharmaverse.github.io/admiralpeds/, https://github.com/pharmaverse/admiralpeds


Browse source code at https://github.com/cran/admiralpeds


Authors: Fanny Gautier [aut, cre] (ORCID: , Ross Farrugia [aut] , Zelos Zhu [aut] , Sukalpo Saha [aut] , Lina Patil [aut] , Samia Kabi [aut] , Laura Liao [ctb] , Remigiusz Kudlacz [ctb] , Pierre Wallet [ctb] , Amin Sherzad [ctb] , David Freedman [ctb] , Mahmoud Hamza [ctb] , Cytel Inc. [cph, fnd] , F. Hoffmann-La Roche AG [cph, fnd] , Pfizer Inc. [cph, fnd] , Atorus Research [cph, fnd]


Documentation:   PDF Manual  


Apache License (>= 2) license


Imports admiral, admiraldev, cli, dplyr, magrittr, purrr, rlang, tidyselect, zoo

Suggests DT, here, htmltools, knitr, lubridate, pharmaversesdtm, rmarkdown, stringr, testthat, tibble, yaml


See at CRAN