R Utilities for GFF Files

R utilities for gff files, either general feature format (GFF3) or gene transfer format (GTF) formatted files. This package includes functions for producing summary stats, check for consistency and sorting errors, conversion from GTF to GFF3 format, file sorting, visualization and plotting of feature hierarchy, and exporting user defined feature subsets to SAF format. This tool was developed by the BioinfoGP core facility at CNB-CSIC.


Reference manual

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install.packages("Rgff")

0.1.7 by Juan Antonio Garcia-Martin, a year ago


Browse source code at https://github.com/cran/Rgff


Authors: Juan Antonio Garcia-Martin [cre, aut] (ORCID: , Juan Carlos Oliveros [aut, ctb] (ORCID: , Rafael Torres-Perez [aut, ctb] (ORCID:


Documentation:   PDF Manual  


GPL (>= 3) license


Imports withr, rlang, stringi, data.tree, tibble, dplyr, jsonlite, magrittr

Suggests DiagrammeR, DiagrammeRsvg, rsvg, rmarkdown, knitr, GenomicRanges, rtracklayer, S4Vectors


See at CRAN