Our method integrates information from all sequenced samples, thus avoiding loss of alleles due to low coverage. Moreover, it increases the statistical power to uncover sequencing or alignment errors.
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Rafael Campos-Martin, 21 days ago
Browse source code at
Rafael Campos-Martin [cre]
Sophia Schmickler [aut]
Manish Goel [ctb]
Korbinian Schneeberger [aut]
Achim Tresch [aut]
GPL (>= 2)
Imports methods, e1071, reshape2, ggplot2, TailRank, JuliaCall, IRanges, qpdf, grDevices, graphics, stats, utils
Depends on GenomicRanges, GenomeInfoDb
Suggests knitr, rmarkdown, markdown, Gviz, rtracklayer
See at CRAN