Random Effects for the Identification of Differential Splicing

Contains the REIDS model presented in Van Moerbeke et al (2017) for the detection of alternative splicing. The method is extended by incorporating junction information for the assessment of alternative splicing. The vignette introduces the model and shows an example work flow.


Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.


0.1.0 by Marijke Van Moerbeke, a year ago

Browse source code at https://github.com/cran/REIDS

Authors: Marijke Van Moerbeke

Documentation:   PDF Manual  

GPL-3 license

Imports data.table, RColorBrewer, MCMCpack, lmtest, methods

Depends on aroma.affymetrix, aroma.core, GenomeGraphs, biomaRt

See at CRAN