A Modified Fisher’s Method to Test Overall Gene-Level Effect

The separate p-values of SNPs, RNA expressions and DNA methylations are calculated by KM regression. The correlation between different omics data are taken into account. This method can be applied to either samples with all three types of omics data or samples with two types.


News

Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("OmnibusFisher")

1.0 by Qi Yan, 2 years ago


Browse source code at https://github.com/cran/OmnibusFisher


Authors: Qi Yan


Documentation:   PDF Manual  


GPL (>= 2) license


Imports survey

Depends on CompQuadForm, stringr


See at CRAN