Parsimonious Families of Hidden Markov Models for Matrix-Variate Longitudinal Data

Implements three families of parsimonious hidden Markov models (HMMs) for matrix-variate longitudinal data using the Expectation-Conditional Maximization (ECM) algorithm. The package supports matrix-variate normal, t, and contaminated normal distributions as emission distributions. For each hidden state, parsimony is achieved through the eigen-decomposition of the covariance matrices associated with the emission distribution. This approach results in a comprehensive set of 98 parsimonious HMMs for each type of emission distribution. Atypical matrix detection is also supported, utilizing the fitted (heavy-tailed) models.


Reference manual

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install.packages("MatrixHMM")

1.0.0 by Salvatore D. Tomarchio, 2 years ago


Browse source code at https://github.com/cran/MatrixHMM


Authors: Salvatore D. Tomarchio [aut, cre]


Documentation:   PDF Manual  


GPL (>= 3) license


Imports data.table, doSNOW, foreach, LaplacesDemon, mclust, progress, snow, tensor, tidyr, withr


See at CRAN