Tests of Multispecies Coalescent Gene Tree Simulator Output

Statistical tests for validating multispecies coalescent gene tree simulators, using pairwise distances and rooted triple counts. See Allman ES, Baños HD, Rhodes JA 2023. Testing multispecies coalescent simulators using summary statistics, IEEE/ACM Trans Comput Biol Bioinformat, 20(2):1613–1618. .


Reference manual

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install.packages("MSCsimtester")

1.2 by Elizabeth Allman, 2 months ago


Browse source code at https://github.com/cran/MSCsimtester


Authors: Elizabeth Allman [aut, cre, cph] , Hector Banos [aut, cph] , John Rhodes [aut, cph]


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports Rdpack, kSamples, graphics, stats, methods

Depends on ape


See at CRAN