Estimating Frequencies, Prevalence and Multiplicity of Infection

The implemented methods reach out to scientists that seek to estimate multiplicity of infection (MOI) and lineage (allele) frequencies and prevalences at molecular markers using the maximum-likelihood method described in Schneider (2018) , and Schneider and Escalante (2014) . Users can import data from Excel files in various formats, and perform maximum-likelihood estimation on the imported data by the package's moimle() function.


Reference manual

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0.1.1 by Meraj Hashemi, a year ago

Browse source code at

Authors: Meraj Hashemi [cre, aut, com] , Kristan Schneider [aut, ths]

Documentation:   PDF Manual  

GPL-3 license

Imports XLConnect, rJava, Rdpack, Rmpfr

Suggests knitr, rmarkdown

See at CRAN