Complete Functional Regulation Analysis

Calculates complete functional regulation analysis and visualize the results in a single heatmap. The provided example data is for biological data but the methodology can be used for large data sets to compare quantitative entities that can be grouped. For example, a store might divide entities into cloth, food, car products etc and want to see how sales changes in the groups after some event. The theoretical background for the calculations are provided in New insights into functional regulation in MS-based drug profiling, Ana Sofia Carvalho, Henrik Molina & Rune Matthiesen, Scientific Reports .


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Reference manual

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install.packages("CoFRA")

0.1002 by Rune Matthiesen, 4 months ago


Browse source code at https://github.com/cran/CoFRA


Authors: Rune Matthiesen [aut, cre]


Documentation:   PDF Manual  


GPL-2 | file LICENSE license


Imports gplots, grid, methods, parallel, stats, stringr

Suggests knitr, rmarkdown


See at CRAN