Collate Gene Annotation Data from Uniprot and NIH Gene Databases

Taking a list of genes, the package collates together the summary information about those genes from the publicly available resources at Uniprot and NCBI. Additionally, the package is able to collate publication information from a search of the NCBI Pubmed database.


News

UNGeneAnno v0.1.6 (Release date: 2016-09-20)

Changes:

  • PubMed search functionality expanded to facilitate inclusion in base pipeline
  • Modification of produceOutputFiles() to optionally include PubMed search results

UNGeneAnno v0.1.5

Changes:

  • Update to include unit tests for primary functions
  • Corrected case usage in package name
  • File structure improved

UNGeneAnno v0.1.4 (Release date: 2016-07-24)

Changes:

  • Addition of UNGeneAnno documentation
  • Removal of unnecessary usage examples from vignette and documentation

Reference manual

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install.packages("ungeneanno")

0.1.6 by I. Richard Thompson, 7 months ago


Browse source code at https://github.com/cran/ungeneanno


Authors: I. Richard Thompson [aut, cre]


Documentation:   PDF Manual  


GPL-3 license


Depends on httr, methods, XML

Suggests knitr, rmarkdown, testthat


See at CRAN